Ticket #1625: xlpeh000.xlpeh.d15222.t140203.leave

File xlpeh000.xlpeh.d15222.t140203.leave, 34.2 KB (added by scottyiu, 5 years ago)

.leave file for xlpeh

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1--------------------------------------------------------------------------------
2*** scottyiu   Job: 3079500.sdb   started: 10/08/15 21:10:11   host: mom1 ***
3*** scottyiu   Job: 3079500.sdb   started: 10/08/15 21:10:11   host: mom1 ***
4*** scottyiu   Job: 3079500.sdb   started: 10/08/15 21:10:11   host: mom1 ***
5*** scottyiu   Job: 3079500.sdb   started: 10/08/15 21:10:11   host: mom1 ***
6
7--------------------------------------------------------------------------------
8*****************************************************************
9     Version 8.4 template, Unified Model ,  Non-Operational
10     Created by UMUI version 8.4                       
11*****************************************************************
12Host is mom1
13PATH used = /opt/cray/stat/2.1.0.1/bin:/work/y07/y07/cse/python/2.7.6/bin:/opt/cray/mpt/7.1.1/gni/bin:/opt/pbs/12.2.401.141761/bin:/opt/cray/atp/1.7.5/bin:/opt/cray/rca/1.0.0-2.0501.48090.7.46.ari/bin:/opt/cray/pmi/5.0.6-1.0000.10439.140.2.ari/bin:/opt/cray/cce/8.3.7/cray-binutils/x86_64-unknown-linux-gnu/bin:/opt/cray/cce/8.3.7/craylibs/x86-64/bin:/opt/cray/cce/8.3.7/cftn/bin:/opt/cray/cce/8.3.7/CC/bin:/opt/cray/craype/2.2.1/bin:/opt/cray/llm/default/bin:/opt/cray/llm/default/etc:/opt/cray/xpmem/0.1-2.0501.48424.3.3.ari/bin:/opt/cray/dmapp/7.0.1-1.0501.8315.8.4.ari/bin:/opt/cray/ugni/5.0-1.0501.8253.10.22.ari/bin:/opt/cray/udreg/2.3.2-1.0501.7914.1.13.ari/bin:/opt/cray/lustre-cray_ari_s/2.4_3.0.80_0.5.1_1.0501.7664.16.1-1.0501.18401.34.1/sbin:/opt/cray/lustre-cray_ari_s/2.4_3.0.80_0.5.1_1.0501.7664.16.1-1.0501.18401.34.1/bin:/opt/cray/MySQL/5.0.64-1.0000.7096.23.2/sbin:/opt/cray/MySQL/5.0.64-1.0000.7096.23.2/bin:/opt/cray/alps/5.1.1-2.0501.8471.1.1.ari/sbin:/opt/cray/alps/5.1.1-2.0501.8471.1.1.ari/bin:/opt/cray/sdb/1.0-1.0501.48084.4.48.ari/bin:/opt/cray/nodestat/2.2-1.0501.47138.1.78.ari/bin:/opt/modules/3.2.10.2/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib64/jvm/jre/bin:/usr/lib/mit/bin:/usr/lib/mit/sbin:.:/usr/lib/qt3/bin:/work/n02/n02/hum/vn8.4/cce/utils:/work/n02/n02/hum/bin:/work/n02/n02/hum/vn8.4/bin:/opt/cray/bin:/work/n02/n02/hum/vn8.4/cce/utils:/work/n02/n02/hum/bin:/work/n02/n02/hum/vn8.4/bin:/work/n02/n02/scottyiu/xlpeh/bin:/work/n02/n02/hum/vn8.4/cce/scripts:/work/n02/n02/hum/vn8.4/cce/exec
14*****************************************************************
15*****************************************************************
16     Job started at : Mon Aug 10 21:10:11 BST 2015
17*****************************************************************
18*****************************************************************
19     Run started from UMUI
20Ensemble test DJF 2011/11
21This job is using UM directory /work/n02/n02/hum,
22-------------------------------
23Processing STASHC file for ROSE
24-------------------------------
25Backup of STASHC file created!
26/work/n02/n02/scottyiu/tmp/tmp.mom1.15009/xlpeh.stashc_preROSE
27-------------------------------
28Processing STASHC file complete
29-------------------------------
30***************************************************************
31   Starting script :   qsatmos
32   Starting time   :   Mon Aug 10 21:10:12 BST 2015
33***************************************************************
34
35
36/work/n02/n02/scottyiu/xlpeh/bin/qsatmos: Executing model run
37
38*********************************************************
39UM Executable : /work/n02/n02/scottyiu/xlpeh/bin/xlpeh.exe
40*********************************************************
41
42
43
44????????????????????????????????????????????????????????????????????????????????
45???!!!???!!!???!!!???!!!???!!!???!!! ERROR ???!!!???!!!???!!!???!!!???!!!???!!!?
46? Error in routine: io:buffin
47? Error Code:    24
48? Error Message: Error in buffin errorCode=3.00 len=       256/       256
49? Error generated from processor:     0
50? This run generated   4 warnings
51????????????????????????????????????????????????????????????????????????????????
52
53Rank 0 [Mon Aug 10 21:10:15 2015] [c6-2c2s0n3] application called MPI_Abort(MPI_COMM_WORLD, 9) - process 0
54Application 16810024 is crashing. ATP analysis proceeding...
55
56ATP Stack walkback for Rank 0 starting:
57  _start@start.S:113
58  __libc_start_main@libc-start.c:242
59  flumemain_@flumeMain.f90:48
60  um_shell_@um_shell.f90:1668
61  readsize_@readsize.f90:402
62  buffin64_i$io_@io.f90:1843
63  io_ereport$io_@io.f90:488
64  ereport64$ereport_mod_@ereport_mod.f90:107
65  gc_abort_@gc_abort.F90:136
66  mpl_abort_@mpl_abort.F90:43
67  pmpi_abort@0x14dbe0c
68  MPI_Abort@0x14fa80c
69  MPID_Abort@0x15226c1
70  abort@abort.c:92
71  raise@pt-raise.c:42
72ATP Stack walkback for Rank 0 done
73Process died with signal 6: 'Aborted'
74Forcing core dumps of ranks 0, 1
75View application merged backtrace tree with: stat-view atpMergedBT.dot
76You may need to: module load stat
77
78_pmiu_daemon(SIGCHLD): [NID 04383] [c6-2c2s7n3] [Mon Aug 10 21:11:06 2015] PE RANK 60 exit signal Killed
79_pmiu_daemon(SIGCHLD): [NID 04355] [c6-2c2s0n3] [Mon Aug 10 21:11:06 2015] PE RANK 0 exit signal Aborted
80[NID 04355] 2015-08-10 21:11:06 Apid 16810024: initiated application termination
81_pmiu_daemon(SIGCHLD): [NID 04718] [c0-3c1s11n2] [Mon Aug 10 21:11:06 2015] PE RANK 108 exit signal Killed
82_pmiu_daemon(SIGCHLD): [NID 04359] [c6-2c2s1n3] [Mon Aug 10 21:11:06 2015] PE RANK 48 exit signal Killed
83_pmiu_daemon(SIGCHLD): [NID 04356] [c6-2c2s1n0] [Mon Aug 10 21:11:06 2015] PE RANK 12 exit signal Killed
84xlpeh: Run failed
85*****************************************************************
86   Ending script   :   qsatmos
87   Completion code :   137
88   Completion time :   Mon Aug 10 21:11:09 BST 2015
89*****************************************************************
90
91
92/work/n02/n02/scottyiu/xlpeh/bin/qsmaster: Failed in qsatmos in job xlpeh
93***************************************************************
94   Starting script :   qsfinal
95   Starting time   :   Mon Aug 10 21:11:09 BST 2015
96***************************************************************
97
98Checking requirement for atmosphere resubmit...
99/work/n02/n02/scottyiu/xlpeh/bin/qsresubmit: Error: no resubmit details found
100*****************************************************************
101   Ending script   :   qsfinal
102   Completion code :   0
103   Completion time :   Mon Aug 10 21:11:09 BST 2015
104*****************************************************************
105
106
107/work/n02/n02/scottyiu/xlpeh/bin/qsmaster: Failed in qsfinal in job xlpeh
108 <<<< Information about How Many Lines of Output follow >>>>
109 25  lines in main OUTPUT file.
110 149 lines of O/P from pe0.
111 15  lines in SERVER file.
112 <<<<         Lines of Output Information ends          >>>>
113
114
115 ==============================================================================
116 =================================== OUTPUT ===================================
117 ==============================================================================
118
119 UMUI Namelist output in /work/n02/n02/scottyiu/xlpeh/xlpeh.umui.nl
120 DATAW/DATAM file listing in /work/n02/n02/scottyiu/xlpeh/xlpeh.list
121 STASH output should be in /work/n02/n02/scottyiu/xlpeh/xlpeh.stash
122
123 
124 ==============================================================================
125 =============================== UM RUN OUTPUT ================================
126 ==============================================================================
127
128qsatmos: %MODEL% output follows:-
129
130qsatmos: Stack requested for UM job:  GB
131aprun -n 144 -N 12 -d 2 -S 6 -ss /work/n02/n02/scottyiu/xlpeh/bin/xlpeh.exe
132 
133 =====================================================
134 GCOM Version 5.1
135 ARCHER_MPI
136 Using precision : 64bit INTEGERs and 64bit REALs
137 Built at Thu Apr 16 09:23:57 BST 2015
138 =====================================================
139 
140WARNING - REQUESTED AND ACTUAL THREADING LEVEL DIFFERENT
141THREAD LEVEL REQUESTED is MPL_THREAD_MULTIPLE
142THREAD LEVEL SET is MPL_THREAD_SERIALIZED
143Enabling  0 I/O PEs
144gc_abort (Processor     0): Job aborted from ereport.
145Application 16810024 exit codes: 134, 137
146Application 16810024 exit signals: Killed
147Application 16810024 resources: utime ~253s, stime ~4s, Rss ~96956, inblocks ~344433, outblocks ~959642
1480+1 records in
1490+1 records out
1501038 bytes (1.0 kB) copied, 0.0013393 s, 775 kB/s
151 ******************************************
152 App ID: 2, Name:Unified Model
153 ------------------------------------------
154  - Data size is 64 bit. Program is 64 bit.
155  - Program is parallel.
156 ******************************************
157
158**************************** PROCESSOR INFORMATION ****************************
159
160    144 Processors initialised.
161I am PE       0 on nid04355
162I am running with  2 thread(s).
163OpenMP Specification: 200805
164
165*******************************************************************************
166**************** Start of UM RUN Job : 21:10:15 on 10/08/2015 *****************
167*******************************************************************************
168
169IO: Initialised IO
170IOS: Info: Control file:/work/n02/n02/scottyiu/tmp/tmp.mom1.15009/xlpeh.ioscntl
171IOS: Info: Reading IOS control file
172IOS: Info: Serialized threading available.
173IOS: Info: Task spacing               =   144 tasks
174IOS: Info: Task offset                =     0 tasks
175IOS: Info: Interleaved servers        = F
176IOS: Info: Server size                =     1 tasks
177IOS: Info: Buffer size                =  1500 MB
178IOS: Info: Verbosity                  = 3
179IOS: Info: Asynchronous stash         = F
180IOS: Info: Asynchronous dumps         = F
181IOS: Info: Serialise all mpi calls    = T
182IOS: Info: Only thread zero calls MPI = F
183IOS: Info: Read only files stay local = T
184IOS: Info: Unit allocation policy     = 1
185IOS: Info: Polling Interval           =  1000
186IOS: Info: Timeout Interval           = 120
187IOS: Info: Lock Metering              = F
188IOS: Info: Acquire model output level = T
189IOS: Info: Use helper threads         = F
190IOS: Info: Async Dispatch slots       =  40
191IOS: Info: Async Stash Dispatch slots =  20
192IOS: Info: Async fields/levs per pack =  76
193IOS: Info: Async send empty tiles     = F
194IOS: Info: Async stats profiling      = F
195IOS: Info: IO servers are not configured
196IOS: Info: Original Rank=      0 Global_Rank=      0 Model_Rank=      0
197IOS: Info: Total Size=    144 Submodel size=    144
198 
199Communicators....
200 
201    Function     Comm ID  Processors     My Rank
202    --------     -------  ----------     -------
203      Global  1140850688         144           0
204       Model -1006632960         144           0
205          IO    67108864           0          -1
206      Leader -2080374777           1           0
207 
208IOS: Info: Configuration not IOS capable, deactivating IOS
209IOS: Info: Reason:No IO server processes assigned
210Running Atmospheric code as pe       0
211MPPIO_File_Utils: Initialised file utils using unit   8
212Opened pipe file /work/n02/n02/scottyiu/tmp/tmp.mom1.15009/xlpeh.pipe.15048 locally for job control
213JOB CONTROL:     0.001:**WAKEUP**         
214
215????????????????????????????????????????????????????????????????????????????????
216??????????????????????????????????? WARNING ????????????????????????????????????
217? Warning in routine: warn_temp_fixes
218? Warning Code:  -100
219? Warning Message: Model run excludes ticket #4800 as L_p2t_weight_fix=.FALSE.
220? Warning generated from processor:     0
221????????????????????????????????????????????????????????????????????????????????
222
223
224????????????????????????????????????????????????????????????????????????????????
225??????????????????????????????????? WARNING ????????????????????????????????????
226? Warning in routine: warn_temp_fixes
227? Warning Code:  -100
228? Warning Message: Model run excludes ticket #4982 as l_rm_neg_par=.FALSE.
229? Warning generated from processor:     0
230????????????????????????????????????????????????????????????????????????????????
231
232
233????????????????????????????????????????????????????????????????????????????????
234??????????????????????????????????? WARNING ????????????????????????????????????
235? Warning in routine: warn_temp_fixes
236? Warning Code:  -100
237? Warning Message: Model run excludes ticket #4612 as L_error_ancil_struct=.FALSE.
238? Warning generated from processor:     0
239????????????????????????????????????????????????????????????????????????????????
240
241
242******************** Readlsta: Atmosphere run-time constants *******************
243 &TEMP_FIXES  L_P2T_WEIGHT_FIX = F, L_RM_NEG_PAR = F, L_ERROR_ANCIL_STRUCT = F /
244 &RUN_CLOUD  RHCRIT = 0.92000000000000004,  0.91800000000000004,  0.91600000000000004,  0.91200000000000003,  0.90800000000000003,  0.90300000000000002,  0.89800000000000002,  0.89100000000000001,  0.88500000000000001,  0.877,  0.86899999999999999,  0.85899999999999999,  0.84999999999999998,  0.83899999999999997,  0.82799999999999996,  0.81499999999999995,  0.80300000000000005,  68*0.80000000000000004,  165*-1073741824., L_EACF = F, CLOUD_FRACTION_METHOD = 2, FORCED_CU = 0, DBSDTBS_TURB_0 = 1.49999999999999987E-4, PC2_FALLICESHEAR_METHOD = 2, L_ENSURE_MIN_IN_CLOUD_QCF = T, L_FIXBUG_PC2_QCL_INCR = T, I_FIXBUG_PC2_CHECKS = 2, L_FIXBUG_PC2_MIXPH = F, I_PC2_CONV_COUPLING = 3, I_PC2_EROSION_METHOD = 3, L_MICRO_EROS = F, STARTICETKELVIN = 273.14999999999998, ALLICETDEGC = -20., CFF_SPREAD_RATE = 1.00000000000000002E-3, ICE_WIDTH = 2.00000000000000004E-2 /
245 &RUN_BLVEG  ILAYERS = 10 /
246 &RUN_BL  FORMDRAG = 1, OROG_DRAG_PARAM = 0.14999999999999999, L_USE_BL_DIAG_TERM = F, SBL_OP = 6, CBL_OP = 2, COR_UST = 2, COR_MO_ITER = 3, L_SBLEQ = F, L_SBLCO = T, ALPHA_CD = 2.,  49*1.5,  200*-1073741824., MUW_SBL = 1.5, MWT_SBL = 1., ISHEAR_BL = 1, NG_STRESS = 2, DECFIX = 1, STOPWE_SBL = 1, TRWEIGHTS1 = 1, FLUX_GRAD = 0, NON_LOCAL_BL = 1, NL_BL_LEVELS = 30, PAR_MEZCLA_MAX = 0.5, PAR_MEZCLA = 0.14999999999999999, PAR_MEZCLA_MIN = 5.0000000000000001E-3, G0_MAX = 20., G0_RP = 10., G0_MIN = 5., CHARNOCK_MAX = 2.59999999999999988E-2, CHARNOCK = 1.79999999999999986E-2, CHARNOCK_MIN = 1.00000000000000002E-2, LAMBDA_MIN_MAX = 100., LAMBDA_MIN_RP = 40., LAMBDA_MIN_MIN = 20., RICRIT_MAX = 1., RICRIT_RP = 1., RICRIT_MIN = 0.25, A_ENT_1_MAX = 0.40000000000000002, A_ENT_1_RP = 0.23000000000000001, A_ENT_1_MIN = 0.10000000000000001, G1_MAX = 1.5, G1_RP = 0.84999999999999998, G1_MIN = 0.5, L_LAMBDAM2 = F, L_FULL_LAMBDAS = F, LOCAL_FA = 1, PRANDTL = 1, SEASALINITYFACTOR = 0.97999999999999998, ISEAZ0T = 1, BUDDY_SEA = 1, L_US_BLSOL = T, PUNS = 0.5, PSTB = 2., FD_STAB_DEP = 0, KEEP_RI_FA = 1, WEIGHTLOUISTOLONG = 0., VARIABLE_RIC = 1, IDYNDIAG = 4, ZHLOC_DEPTH_FAC = 0.29999999999999999, ENTR_SMOOTH_DEC = 0, ENTR_ENHANCE_BY_CU = 1, DEC_THRES_CLOUD = 0.10000000000000001, ISRFEXCNVGUST = 1, FRIC_HEATING = 1, SG_OROG_MIXING = 0, SUBS_COUPLE_FIX = 1, BDY_TKE = 0, TKE_DLEN = 1, L_TKE_DLEN_BLACKADAR = F, TKE_CM_MX = 0.10000000000000001, TKE_CM_FA = 0.10000000000000001, L_MY3_IMPROVED_CLOSURE = T, MY_LOWEST_PD_SURF = 0, L_MY_CONDENSE = T, L_SHCU_BUOY = T, L_ADV_TURB_FIELD = T, L_MY_EXTRA_LEVEL = F, MY_Z_EXTRA_FACT = 0.5, L_MY_PROD_ADJ = T, MY_PROD_ADJ_FACT = 250*0.22500000000000001, TKE_LEVELS = -1, L_MY_INITIALIZE = F, L_MY_INI_ZERO = F, L_LOCAL_ABOVE_TKELVS = F, L_HIGH_ADV_TURB = T, L_MONO_ADV_TURB = F, L_CONSERV_ADV_TURB = F, HIGH_ORDER_SCHEME_ADV_TURB = 1, MONOTONE_SCHEME_ADV_TURB = 0, L_PRINT_MAX_TKE = F, L_MY_LOWEST_PD_SURF_TQC = F, MY_INI_DBDZ_MIN = 1.00000000000000008E-5, MY_Z_LIMIT_ELB = 10000000000., WB_NG_MAX = 5.00000000000000028E-2, SHCU_LEVELS = -1, RELAX_SC_OVER_CU = 0 /
247 &RUN_PRECIP  L_CRY_AGG_DEP = F, L_IT_MELTING = F, L_AUTOC_3B = F, L_WARM_NEW = F, L_AUTOLIM_3B = F, L_PSD = F, L_PSD_GLOBAL = F, L_HALLETT_MOSSOP = F, L_AUTOCONV_MURK = F, X1R = 0.22, X2R = 2.2000000000000002, C_R_CORREL = -1073741824., AI = 1.84999999999999991E-2, BI = 1.8999999999999999, AIC = 1.84999999999999991E-2, BIC = 1.8999999999999999, LSP_EIC = 6.04900000000000021E-2, LSP_FIC = 0.83099999999999996, AR = 1., ARC = 1., TNUC = -10., LSITER = 1, Z_PEAK_ND = 500., NDROP_SURF = 20000000., L_DROPLET_TPR = F, L_CLARK_AERO = F, L_TAPER_NEW = F, MAX_DROP_SURF = 100000000., L_RAINFALL_AS = T, L_MCR_ITER = T, NITER_BS = 10, L_SR2GRAUP = F, L_MCR_ARCL = F, ARCL_INHOM_SC = -1073741824. /
248 &RUN_CONVECTION  L_MOM = T, L_FIX_UDFACTOR = F, L4A_KTERM = F, L_EMAN_DD = F, L_CLOUD_DEEP = T, L_REDIAGNOSIS = F, L_DCPL_CLD4PC2 = T, L_ANVIL = T, L_MURK_CONV = F, L_SAFE_CONV = F, L_CV_CONSERVE_CHECK = F, N_CONV_CALLS = 2, A_CONVECT_SEGMENTS = -99, A_CONVECT_SEG_SIZE = 80, SH_PERT_OPT = 1, DD_OPT = 1, DEEP_CMT_OPT = 5, MID_CMT_OPT = 0, TERMCONV = 1, ADAPT = 7, R_DET = 0.90000000000000002, TICE = 263.14999999999998, QSTICE = 3.50000000000000007E-3, ENT_FAC = 1., ENT_FAC_DP = 1.3500000000000001, ENT_FAC_MD = 0.90000000000000002, ENT_OPT_DP = 3, ENT_OPT_MD = 0, ENT_DP_POWER = 2., ENT_MD_POWER = -1073741824., BL_CNV_MIX = 1, MID_CNV_PMIN = 10000., AMDET_FAC = 3., CCW_FOR_PRECIP_OPT = 4, CNV_WAT_LOAD_OPT = 0, TV1_SD_OPT = 2, LIMIT_PERT_OPT = 2, ICVDIAG = 1, PLUME_WATER_LOAD = 0, DIL_PLUME_WATER_LOAD = 0, CVDIAG_INV = 0, CVDIAG_SH_WTEST = 2.00000000000000004E-2, CAPE_OPT = 3, CAPE_BOTTOM = 5, CAPE_TOP = 50, CAPE_TIMESCALE = 3600., W_CAPE_LIMIT = 0.29999999999999999, CAPE_MIN = 0.5, CLD_LIFE_OPT = 0, RAD_CLOUD_DECAY_OPT = 2, CCA_MIN = 2.00000000000000004E-2, FIXED_CLD_LIFE = 7200., UD_FACTOR = 1., MPARWTR = 1.50000000000000003E-3, QLMIN = 2.99999999999999974E-4, FAC_QSAT = 0.5, EFF_DCFL = -1073741824., EFF_DCFF = -1073741824., CCA2D_SH_OPT = 1, CCA_SH_KNOB = 0., CCW_SH_KNOB = 0., CCA2D_MD_OPT = 1, CCA_MD_KNOB = 0., CCW_MD_KNOB = 0., CCA2D_DP_OPT = 1, CCA_DP_KNOB = 0., CCW_DP_KNOB = 0., ANVIL_FACTOR = 1., TOWER_FACTOR = 1., ANV_OPT = 0, ICONV_SHALLOW = 1, ICONV_MID = 1, ICONV_DEEP = 1, ICONV_CONGESTUS = 0 /
249 &RUN_STOCHASTIC  L_SKEB2 = F, L_RP2 = F, N1 = 20, N2 = 144, RV = 5., BR = 2.75000000000000001E-2, TOT_BACKSCAT = 1.00000000000000005E-4, TAU = 20000., ALPHAC = 2.00000000000000004E-3, L_SKEB2_PSICDISP = F, L_SKEB2_PSISDISP = F, L_SKEB2_SKEB1DISP = F, L_SKEB2_CDISP_CAPE = T, L_SKEB2_CDISP_MFLX = F, SDISPFAC = 2., CDISPFAC = 1., KDISPFAC = 0.5, NSMOOTH = 5, SKEB2_TOPLEV = 37, SKEB2_BOTLEV = 2, L_SKEB2_VELPOT = F, RAN_MAX = 1, RHCRIT_REF_LEVEL = 3, L_SKEBSMOOTH_ADV = F, L_SKEBPRINT = F, ENTCOEF_MIN = 2.75, ENTCOEF_MAX = 4., CAPE_TIMESCALE_MIN = 1800., CAPE_TIMESCALE_MAX = 3600., M_CI = 1., M_CI_MAX = 1.3999999999999999, M_CI_MIN = 0.59999999999999998, RHCRIT_MAX = 0.91000000000000003, RHCRIT_MIN = 0.875 /
250 &RUN_RADIATION  CUSACK_AERO = 2, CUSACK_AERO_HGT = -32768, AEROSCL_CSK_CLIM = 5*1., A_SW_SEGMENTS = -99, A_SW_SEG_SIZE = 80, A_LW_SEGMENTS = -99, A_LW_SEG_SIZE = 80, CO2_MMR = 5.61246000000000054E-4, L_SEC_VAR = F, L_EQT = T, INHOM_CLOUD_SW = 4*-1073741824., INHOM_CLOUD_LW = 4*-1073741824., DP_CORR_STRAT = 10000., RAD_MCICA_SAMPLING = 2, RAD_MCICA_SIGMA = 0.75, DP_CORR_CONV = -1073741824., AERO_BL_LEVELS = 50, L_RAD_USE_CLIM_VOLC = F, CLIM_RAD_VOLC_ERUPTION_YEAR = -32768, CLIM_RAD_VOLC_ERUPTION_MONTH = -32768, CLIM_RAD_VOLC_ERUPTION_WEIGHT = -1073741824., ALPHAM = 0.59999999999999998, SSALPHAM = -1073741824., ALPHAC = 0.80000000000000004, SSALPHAC = -1073741824., ALPHAB = -1073741824., DTICE = 10., SSDTICE = -1073741824., DT_BARE = -1073741824., DALB_BARE_WET = -1073741824., PEN_RAD_FRAC = -1073741824., SW_BETA = -1073741824., N2OMMR = 4.80099999999999965E-7, CH4MMR = 9.67000000000000017E-7, C11MMR = 1.23499999999999997E-9, C12MMR = 2.26599999999999983E-9, O2MMR = 0.23139999999999999, C113MMR = 5.29700000000000042E-10, C114MMR = 9.73699999999999957E-11, HCFC22MMR = 4.313E-10, HFC125MMR = 6.18299999999999981E-12, HFC134AMMR = 5.43899999999999991E-11, IS_NCOL = 300, I_CLOUD_REPRESENTATION = 2, I_CLOUD_REPRESENTATION_2 = 2, I_INHOM = 2, I_INHOM_2 = 0, I_OVERLAP = 3, I_OVERLAP_2 = 0, I_FSD = 0, I_FSD_2 = -32768, L_RAD_SNOW_EMIS = T, L_T_LAND_NOSNOW = T, L_QUAD_T_COAST = T, L_T_RAD_SOLID = T /
251 &RUN_GWD  KAY_GWAVE = 3300., GWD_FRC = 4., GWD_FSAT = -1073741824., GSHARP = -1073741824., FBCD = -1073741824., L_SMOOTH = F, L_USSP_OPAQUE = T, USSP_LAUNCH_FACTOR = 1.5, GWD_FRC_MAX = 4., GWD_FRC_MIN = 2., KAY_GWAVE_MAX = 133000., KAY_GWAVE_MIN = 75000. /
252 &RUN_AEROSOL  SO2_HIGH_LEVEL = 8, SOOT_HIGH_LEVEL = 3, BMASS_HIGH_LEVEL_1 = 3, BMASS_HIGH_LEVEL_2 = 20, OCFF_HIGH_LEVEL = 3 /
253 &RUN_DUST  US_AA = 0., US_AM = 1.45, UST_AA = 0., UST_AM = 1., SM_CORR = 0.5, HORIZ_D = 2.5, CLAY_MAX = 0.10000000000000001, FLAND_LIM = 0.99999000000000005, L_FIX_SIZE_DIST = F, SIZE_DIST = 5.0000000000000001E-4,  4.89999999999999984E-3,  2.98999999999999995E-2,  0.2329,  0.4839,  0.24790000000000001, DUST_VEG_EMISS = 1 /
254 &RUN_UKCA  L_UKCA_CHEM = F, L_UKCA_ADVH2O = F, L_UKCA_PHOT2D = F, L_UKCA_FASTJ = F, L_UKCA_FASTJX = F, L_UKCA_TROP = F, L_UKCA_RAQ = F, L_UKCA_EXTTC = F, L_UKCA_TROPISOP = F, L_UKCA_STRAT = F, L_UKCA_STRATTROP = F, L_UKCA_STRATCFC = F, L_UKCA_STD_TROP = F, L_UKCA_AERCHEM = F, L_UKCA_ACHEM = F, L_UKCA_MODE = F, L_UKCA_DUST = F, L_UKCA_AGEAIR = F, L_UKCA_QCH4INTER = F, L_UKCA_ISOPINTER = F, L_UKCA_TERPINTER = F, L_UKCA_USEUMUIVALS = F, L_UKCA_HET_PSC = F, L_UKCA_SA_CLIM = F, L_UKCA_H2O_FEEDBACK = F, L_UKCA_RADO3 = F, L_UKCA_RADCH4 = F, L_UKCA_RADN2O = F, L_UKCA_RADF11 = F, L_UKCA_RADF12 = F, L_UKCA_RADF113 = F, L_UKCA_RADF22 = F, L_UKCA_RADCH2O = F, L_UKCA_INTDD = F, L_UKCA_TROPHET = F, L_UKCA_PRESCRIBECH4 = F, L_UKCA_SET_TRACE_GASES = F, L_UKCA_USE_BACKGROUND_AEROSOL = F, L_UKCA_PRIMSU = F, L_UKCA_PRIMSS = F, L_UKCA_PRIMBCOC = F, L_UKCA_PRIMDU = F, L_UKCA_SEDI = F, L_UKCA_NUCL = F, L_UKCA_USE_2DTOP = F, L_BCOC_FF = F, L_BCOC_BF = F, L_BCOC_BM = F, L_MODE_BHN_ON = F, L_MODE_BLN_ON = F, L_UKCA_ARG_ACT = F, L_UKCA_SFIX = F, JPCTR = 0, JPSPEC = 0, JPBK = 0, JPTK = 0, JPPJ = 0, JPHK = 0, JPNR = 0, JPDD = 0, JPDW = 0, I_MODE_SETUP = 0, I_MODE_SIZEPRIM = 0, I_MODE_NUCSCAV = 0, I_MODE_DDEPAER = 0, I_MODE_NZTS = 0, I_MODE_SS_SCHEME = 0, I_MODE_DU_SCHEME = 0, I_MODE_BLN_METHOD = 0, I_MODE_BLN_PARAM_METHOD = 0, MODE_PARFRAC = 0., DTS0 = 300, NIT = 8, JVSPEC_DIR = jvspec dir is unset                                                                                                                                                                                                                                             , JVSPEC_FILE = jvspec file is unset                                                                                                                                                                                                                                            , JVSCAT_FILE = jvscat file is unset                                                                                                                                                                                                                                            , PHOT2D_DIR = phot2d dir is unset                                                                                                                                                                                                                                             , STRAT2D_DIR = strat2d dir is unset                                                                                                                                                                                                                                            , FASTJX_NUMWL = 0, FASTJX_MODE = 0, FASTJX_PRESCUTOFF = 0., DIR_STRAT_AER = dir_strat_aer is unset                                                                                                                                                                                                                                          , FILE_STRAT_AER = file_strat_aer is unset                                                                                                                                                                                                                                         , DIR_REFF_SULP = dir_reff_sulp is unset                                                                                                                                                                                                                                          , FILE_REFF_SULP = file_reff_sulp is unset                                                                                                                                                                                                                                         , UKCA_MEBRMMR = -1073741824., UKCA_MECLMMR = -1073741824., UKCA_CH2BR2MMR = -1073741824., UKCA_H2MMR = -1073741824., UKCA_N2MMR = -1073741824., UKCA_CFC115MMR = -1073741824., UKCA_CCL4MMR = -1073741824., UKCA_MECCL3MMR = -1073741824., UKCA_HCFC141BMMR = -1073741824., UKCA_HCFC142BMMR = -1073741824., UKCA_H1211MMR = -1073741824., UKCA_H1202MMR = -1073741824., UKCA_H1301MMR = -1073741824., UKCA_H2402MMR = -1073741824., UKCA_COSMMR = -1073741824. /
255 &RUN_NUDGING  NDG_RELAX_UVALUE = -1073741824., NDG_RELAX_VVALUE = -1073741824., NDG_RELAX_TVALUE = -1073741824., NDG_LEV_BOTTOM = -32768, NDG_LEV_TOP = -32768, NDG_ON_LEV_BOTTOM = -32768, NDG_ON_LEV_TOP = -32768, NDG_DATAPATH =                                                                                                                                                                                                                                                                 , NDG_HOURS_PERDATA = -32768, NDG_ANALYSIS_SOURCE = -32768, NDG_STRAT_FAC = -1073741824. /
256 &RUN_DYN  L_GCR_CYCLE_OPT = T, L_MIX_RATIO = T, L_NEW_TDISC = F, L_THMONO_FIXED = T, INTRAND_SEED = 0, L_TRANSPARENT = F, L_REGULAR = T, N_RIMS_TO_DO = 1, ALPHA_1 = 0.69999999999999996, ALPHA_2 = 1., ALPHA_3 = 0.69999999999999996, ALPHA_4 = 1., ALPHA_1_2 = 0.59999999999999998, ALPHA_2_2 = 1., ALPHA_3_2 = 0.59999999999999998, ALPHA_4_2 = 1., NUMCYCLES = 1, GCR_USE_RESIDUAL_TOL = F, GCR_ADI_ADD_FULL_SOLN = T, GCR_MAX_ITERATIONS = 100, GCR_PRECON_OPTION = 4, GCR_TOL = 1.00000000000000002E-2, GCR_TOL2 = -1073741824., GCR_ADI_PSEUDO_TIMESTEP = 8.00000000000000038E-4, L_SLICE = F, L_RK_DPS = F, L_INC_SOLVER = F, L_FIX_MASS = F, L_CONSERV_SMOOTH_LAP = F, ALPHA_U = 0., ALPHA_V = 0., ALPHA_W = 0., ALPHA_THETA = 0., ALPHA_RHO = 0., ALPHA_RELAX_TYPE = 1, ALPHA_RELAX_INT = 10, INNITS = -32768, L_ELIMINATE_RHO = F, L_ACCEL_CONVERGENCE = F, L_DYNAMIC_REFPRO = T, FILTER_REFPRO = 0, UPDATE_REFPRO_EVERY = 1, EG_VERT_DAMP_PROFILE = -32768, EG_VERT_DAMP_COEFF = -1073741824., L_EXPL_HORZ_DRAG = F, L_IMPL_HORZ_DRAG = F, L_EG_DRY_STATIC_ADJ = F, INTERP_DPT_PT = F, INTERP_LOG_RHO = F, TOTAL_CONV_OUTER = F, TOTAL_CONV_INNER = F, N_FILT_ND = 8, FILTER_DUMP = T, L_RHO_AV_ZZ = F /
257 &RUN_DYNTEST  L_DYNAMICS_ONLY = F, L_BACKWARDS = F, L_HYDROSTATIC_EG = F, L_EXCLUDE_PHYSICS2 = F, L_PERTURB_IC_THETA = F, L_DRY = F, L_ADJUST_WET = F, L_FREE_SLIP = F, L_TRAP_UV = F, L_TRAP_W = F, L_TRAP_THETA = F, CW_MAX = -1073741824., UV_LIMIT = -1073741824., MAX_THINC = -1073741824., TRAP_OPTION = -32768, CW_TEST_LEV = -32768, GCR_DIAGNOSTICS = 1, GCR_ITS_AVG_STEP = 12,  24,  1440, LAMBDA_P_END = -1073741824., PHI_P_END = -1073741824., LAMBDA_U_END = -1073741824., PHI_V_END = -1073741824., DLAMBDA_P_END = -1073741824., DPHI_P_END = -1073741824., DLAMBDA_U_END = -1073741824., DPHI_V_END = -1073741824., LAM_VAR = -32768, PHI_VAR = -32768, VAR_RATIO = -1073741824., LAM_RATIO = -1073741824., PHI_RATIO = -1073741824., LAM_FRAC = -1073741824., PHI_FRAC = -1073741824. /
258 &RUN_SL  THMONO_HEIGHT = 500., L_2D_SL_GEOMETRY = F, L_SL_HALO_REPROD = F, L_2DCOMM = F, HIGH_ORDER_SCHEME = 3,  7,  3,  0, MONOTONE_SCHEME = 0,  1,  2*0, RITCHIE_HIGH_ORDER_SCHEME = 0, RITCHIE_MONOTONE_SCHEME = 1, DEPART_ORDER = 2, INTERP_VERTICAL_SEARCH_TOL = 22, L_CONSERVE_TRACERS = T, INSTABILITY_DIAGNOSTICS = 0, MOISTURE_CONSERVATION = 2 /
259 &RUN_DIFFUSION  L_DIFFUSION = F, DIFFUSION_ORDER_THERMO = 250*0, DIFFUSION_ORDER_WIND = 250*0, DIFFUSION_ORDER_W = 250*0, DIFFUSION_ORDER_Q = 250*0, DIFFUSION_COEFFICIENT_THERMO = 250*0., DIFFUSION_COEFFICIENT_WIND = 250*0., DIFFUSION_COEFFICIENT_W = 250*0., DIFFUSION_COEFFICIENT_Q = 250*0., DIFF_ORDER_THERMO = 1, DIFF_TIMESCALE_THERMO = 0, DIFF_ORDER_WIND = 0, DIFF_TIMESCALE_WIND = 0, HORIZONTAL_LEVEL = 51, TAR_HORIZONTAL = 51, L_CDIFFUSION = F, L_RAMP = F, RAMP_LAT_RADIANS = -1073741824., L_DIVDAMP = F, DIV_DAMP_COEFFICIENT = -1.,  249*0., L_POLAR_FILTER = F, L_POLAR_FILTER_INCS = F, POLAR_FILTER_NORTH_LAT_LIMIT = 0., POLAR_FILTER_SOUTH_LAT_LIMIT = 0., POLAR_FILTER_COEFFICIENT = 0., POLAR_FILTER_STEP_PER_SWEEP = 0., POLAR_FILTER_LAT_LIMIT = 0., POLAR_FILTER_N_SWEEPS = 0, L_QPOS = T, Q_POS_METHOD = 4, Q_POS_TRACER_METHOD = 4, QLIMIT = 1.00000000000000002E-8, L_QPOS_DIAG_PR = F, QPOS_DIAG_LIMIT = -1.00000000000000002E-8, L_DIFF_CTL = T, L_TARDIFF_Q = T, W_CONV_LIMIT = 0.29999999999999999, TARDIFFQ_FACTOR = 0.10000000000000001, TARDIFFQ_TEST = 5, TARDIFFQ_START = 1, TARDIFFQ_END = 53, L_SUBFILTER_HORIZ = F, L_SUBFILTER_VERT = F, L_SUBFILTER_BLEND = F, DIFF_FACTOR = 0., MIX_FACTOR = 0., TURB_STARTLEV_HORIZ = 0, TURB_ENDLEV_HORIZ = 0, TURB_STARTLEV_VERT = 0, TURB_ENDLEV_VERT = 0, L_VERTICAL_DIFFUSION = F, L_PFTHETA = T, L_PFUV = T, L_PFW = T, L_PFINCS = T, L_PFEXNER = T, L_POFIL_HADGEM2 = T, L_DIFF_INCS = F, L_DIFF_THERMO = F, L_DIFF_WIND = F, L_DIFF_W = T, LEVEL_START_WIND = 0, LEVEL_STOP_WIND = 0, LEVEL_START_THETA = 0, LEVEL_STOP_THETA = 0, LEVEL_START_Q = 0, LEVEL_STOP_Q = 0, L_POFIL_NEW = T, L_DIFF_AUTO = T, DIFF_COEFF_REF = 0., POLAR_CAP = 85., SCALE_RATIO = 2., REF_LAT_DEG = 0., MAX_SWEEPS = 8, L_UPPER_RAMP = F, UP_DIFF_SCALE = 0.5, TOP_DIFF = 0.10000000000000001, TOP_FILT_START = 1000, TOP_FILT_END = 1000, L_VDIFF_UV = F, VDIFFUV_TIMESCALE = 1, VDIFFUV_TEST = 100., VDIFFUV_FACTOR = 0., VDIFFUV_START = 1000, VDIFFUV_END = 1000, L_ADJUST_THETA = T, ADJUST_THETA_START = 51, ADJUST_THETA_END = 85, L_SPONGE = F, SPONGE_POWER = 1, SPONGE_EW = 0, SPONGE_NS = 0, VERT_DIFFUSION_COEFF_WIND = 0., VERT_DIFFUSION_COEFF_THETA = 0., VERT_DIFFUSION_COEFF_Q = 0., L_DIAG_PRINT = T, L_DIAG_PRINT_OPS = F, L_PRINT_PE = F, L_PRINT_W = F, L_PRINT_WMAX = T, L_PRINT_LAPSE = F, L_PRINT_THETA1 = T, L_PRINT_DIV = F, L_DIAG_WIND = F, L_PRINT_SHEAR = F, L_PRINT_MAX_WIND = F, L_DIAG_NOISE = F, L_DIAG_L2NORMS = F, L_DIAG_L2HELM = F, NORM_LEV_START = 1, NORM_LEV_END = 85, FIRST_NORM_PRINT = 1, DOM_W_IN = 0, DOM_E_IN = 0, DOM_S_IN = 0, DOM_N_IN = 0, BLOCKX_IN = 0, BLOCKY_IN = 0, PRINT_STEP = 1, DIAG_INTERVAL = 1, W_PRINT_LIMIT = 1000., L_FLUSH6 = T /
260 &RUN_RIVERS  RIVER_VEL = 0.40000000000000002, RIVER_MCOEF = 1.3999999999999999 /
261 &RUN_COSP  COSP_CLOUDSAT_SIM = F, COSP_LIDAR_SIM = F, COSP_ISCCP_SIM = F, COSP_MISR_SIM = F, COSP_MODIS_SIM = F, COSP_RTTOV_SIM = F, COSP_NPOINTS_IT = -32768, COSP_NCOLUMNS = -32768, COSP_USE_VGRID = F /
262 &RADFCDIA  C2C_O2 = 4*F, C2C_O3 = 4*F, C2C_CO2 = 4*F, C2C_N2O = 4*F, C2C_CH4 = 4*F, C2C_CFC11 = 4*F, C2C_CFC12 = 4*F, C2C_C113 = 4*F, C2C_HCFC22 = 4*F, C2C_HFC125 = 4*F, C2C_HFC134 = 4*F, C2C_AEROSOL = 4*F, C2C_SULPC_D = 4*F, C2C_SEAS_D = 4*F, C2C_SOOT_D = 4*F, C2C_BMB_D = 4*F, C2C_OCFF_D = 4*F, C2C_LAND_S = 4*F, C2C_ALL = 4*F, C2C_WMG = 4*F, C2C_NITR_D = 4*F, C2C_DUST_D = 4*F, C2C_BIOG_D = 4*F, C2C_UKCA_D = 4*F /
263 
264OPEN:  File /nerc/n02/n02/scottyiu/xlnja_dafiles/xlnjaa.da20111101_00 to be Opened on Unit 21 does not Exist
265OPEN:  **WARNING: FILE NOT FOUND
266OPEN:  Ignored Request to Open File /nerc/n02/n02/scottyiu/xlnja_dafiles/xlnjaa.da20111101_00 for Reading
267****************** IO Error Report ***********************************
268Unit Generating error=   21
269*** File states can be reported by setting diagnostic output levels **
270
271????????????????????????????????????????????????????????????????????????????????
272??????????????????????????????????? WARNING ????????????????????????????????????
273? Warning in routine: io:file_open
274? Warning Code:   -12
275? Warning Message: An error occured opening a file
276? Warning generated from processor:     0
277????????????????????????????????????????????????????????????????????????????????
278
279IO: Open: /nerc/n02/n02/scottyiu/xlnja_dafiles/xlnjaa.da20111101_00 on unit  21                             
280IO: from environment variable ASTART
281****************** IO Error Report ***********************************
282Unit Generating error=   21
283---File States --------------------------
284Unit  21 open on filename /nerc/n02/n02/scottyiu/xlnja_dafiles/xlnjaa.da20111101_00
285  --> Opened from environment variable:ASTART
286  --> File Type:   0
287  --> Read Only: F  --> Write Only: F
288  --> Local: T AllLocal: F Remote: F Broadcast: F
289---End File States ----------------------
290
291????????????????????????????????????????????????????????????????????????????????
292???!!!???!!!???!!!???!!!???!!!???!!! ERROR ???!!!???!!!???!!!???!!!???!!!???!!!?
293? Error in routine: io:buffin
294? Error Code:    24
295? Error Message: Error in buffin errorCode=3.00 len=       256/       256
296? Error generated from processor:     0
297? This run generated   4 warnings
298????????????????????????????????????????????????????????????????????????????????
299
3000+1 records in
3010+1 records out
30224557 bytes (25 kB) copied, 0.00141194 s, 17.4 MB/s
303 ==============================================================================
304 ================================ AUTOPP_TIDYUP ===============================
305 ==============================================================================
306%AUTOPP_TIDYUP
307*****************************************************************
308     Autopp_tidyup in operation
309     Job started at : Mon Aug 10 21:10:12 BST 2015
310*****************************************************************
3110+1 records in
3120+1 records out
313215 bytes (215 B) copied, 0.00121724 s, 177 kB/s
314 ==============================================================================
315 ==================================== SERVER ==================================
316 ==============================================================================
317%SERVER
318qsserver: Starting...
319
320The job is not operational
321
322Machine: LINUXMPP  archsys: true  archhector: true
323Hector achiving has been selected for this run
324
325
326qsserver: The following variables were set up
327qsserver: RUNID=xlpeh
328qsserver: ARCHIVEDIR=/nerc/n02/n02/scottyiu/archive/xlpeh
329
330Files in directory ARCHIVEDIR = /nerc/n02/n02/scottyiu/archive/xlpeh
331total 0
332Server process:... Ending
3330+1 records in
3340+1 records out
335382 bytes (382 B) copied, 0.0013804 s, 277 kB/s
336*****************************************************************
337****************************************************************
338     Job ended at :  Mon Aug 10 21:11:09 BST 2015
339****************************************************************
340*****************************************************************
341 
342--------------------------------------------------------------------------------
343
344Resources requested: ncpus=288,place=free,walltime=05:00:00
345Resources allocated: cpupercent=0,cput=00:00:03,mem=18924kb,ncpus=288,vmem=384028kb,walltime=00:00:59
346
347*** scottyiu   Job: 3079500.sdb   ended: 10/08/15 21:11:09   queue: standard ***
348*** scottyiu   Job: 3079500.sdb   ended: 10/08/15 21:11:09   queue: standard ***
349*** scottyiu   Job: 3079500.sdb   ended: 10/08/15 21:11:09   queue: standard ***
350*** scottyiu   Job: 3079500.sdb   ended: 10/08/15 21:11:09   queue: standard ***
351--------------------------------------------------------------------------------