fcm_make2_um job.err

[freyagarry]

Good morning,

I'm porting a coupled model suite that I got working internally at the Met Office to Monsoon2 (now u-an748, just committed revision 45984). I have changed computer/account and amended branch numbers to call the PUMA NEMO/CICE repositories.

However, the model is now failing at fcm_make2_um - and I'm not really sure what to make of this error message (below) - maybe a failure finding the atmosphere executable, but grep isn't giving me much joy.

I'd be very grateful for any ideas as to what might be causing it?

Cheers,
Freya

[FAIL] ftn -oo/atm_step.o -c -I./include -s default64 -e m -J ./include -I/projects/um1/gcom/gcom5.2/meto_xc40_cra\
y_mpp/build/include -I/projects/um1/grib_api/cce-8.3.4/1.13.0/include -O2 -Ovector1 -hfp0 -hflex_mp=strict -h omp \
/home/d03/fgarry/cylc-run/u-an748/share/fcm_make_um/preprocess-atmos/src/um/src/control/top_level/atm_step.F90 # r\
c=1
[FAIL] ftn-2116 crayftn: INTERNAL
[FAIL] "/opt/cray/cce/8.3.4/cftn/x86-64/lib/optcg" was terminated due to receipt of signal 011: Killed.
[FAIL] compile 25.4 ! atm_step.o ← um/src/control/top_level/atm_step.F90
[FAIL] link —— ! um-atmos.exe ← um/src/control/top_level/um_main.F90
[FAIL] ! atm_step.o : update task failed
[FAIL] ! um-atmos.exe : depends on failed target: atm_step.o

[FAIL] fcm make -C /home/d03/fgarry/cylc-run/u-an748/share/fcm_make_um -n 2 -j 6 # return-code=2
Received signal ERR
cylc (scheduler - 2017-07-10T08:07:16Z): CRITICAL Task job script received signal ERR at 2017-07-10T08:07:16Z
cylc (scheduler - 2017-07-10T08:07:16Z): CRITICAL failed at 2017-07-10T08:07:16Z

[willie]

Hi Freya,

It is failing to compile atm_stem.F90. If you have not changed this part of the program, then the options are it has run out of time (it hasn't) or you have run out of disc space.

So have a clean up and try again.

Regards
Willie

[grenville]

Fixed off line — added

PBS -l mem=5000MB

to suite.rc file