Opened 2 years ago

Closed 2 years ago

#2280 closed help (fixed)

Rose post-processing - [ERROR] global_attr_to_zonal

Reported by: ros Owned by: ros
Component: Archiving Keywords: netcdf, python
Cc: Platform: ARCHER
UM Version:

Description

If Rose post-processing app fails with an error like:

[ERROR]  global_attr_to_zonal - attribute(s) DOMAIN_size_global,DOMAIN_position_first,
DOMAIN_position_last not found in:
/work/n02/n02/ros/cylc-run/u-ai423-pp21/share/data/History_Data/NEMOhist/nemo_ai423o_10d_19780901-19780911_diaptr_0000.nc

This likely means that the netcdf file was created using a different version of netCDF library to what postproc is using to read it.

If your suite is using GC3-PrgEnv/1.1 or GC3-PrgEnv/2.0 then make sure that the postproc task in the suite.rc file is loading nco/4.5.0 and anconda/2.2.0-python2

E.g.

[[postproc]]
    ...
    pre-script = "module load nco/4.5.0; module load anaconda/2.2.0-python2; export PYTHONPATH=$PYTHONPATH:$UMDIR/lib/python2.7; module list; ulimit -s unlimited"


Change History (1)

comment:1 Changed 2 years ago by ros

  • Resolution set to fixed
  • Status changed from new to closed
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