Opened 11 months ago

Closed 9 months ago

Last modified 9 months ago

#3111 closed error (answered)

Module 'scitools' is currently not loaded

Reported by: luciad Owned by: ros
Component: UM Model Keywords: scitools
Cc: Platform: ARCHER
UM Version: 11.1

Description

Hello,

I am trying to run a new application python code within a suite (u-bo228) on Archer, that takes some of the atmos_main output diagnostics and regrids them on a new grid. But I get the error:

ModuleCmd_Switch.c(179):ERROR:152: Module 'scitools' is currently not loaded
[FAIL] env=model_files: DATETIME: unbound variable

Could you help me solve this problem?

Lucia

Change History (6)

comment:1 Changed 11 months ago by ros

Hi Lucia,

scitools is Met Office specific. Please comment out/remove the line that loads scitools. Run it again and we'll see what error message you get. We can then advise on any environment settings required for ARCHER.

Also please let us know what the suite task name is that is failing.

Cheers,
Ros

comment:2 Changed 11 months ago by ros

  • Owner changed from um_support to ros
  • Status changed from new to accepted

Try replacing the scitools line in the suite.rc file with module load anaconda to give you the python environment on ARCHER.

Cheers,
Ros.

comment:3 Changed 10 months ago by luciad

Hi Ros,

I am currently having issues with loading iris, even though I changed "module load anaconda" in the suite.rc

ImportError?: No module named iris

The suite is u-bo228 and the suite task is app_postproc (a python script for extracting data along flight tracks)

Thank you for your help,

Lucia

comment:4 Changed 10 months ago by ros

Hi Lucia,

We don't have a central Iris installation on ARCHER. Unfortunately my personal installation from a while ago is no longer working so I can only suggest getting your own miniconda (See https://www.archer.ac.uk/documentation/user-guide/python.php#cenv) and installing Iris into it.

Regards,
Ros.

comment:5 Changed 9 months ago by ros

  • Resolution set to answered
  • Status changed from accepted to closed

I assume you were able to use miniconda ok and that this ticket can now be closed.

Regards,
Ros.

comment:6 Changed 9 months ago by luciad

Indeed, it's solved. Thank you.

Lucia

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