Opened 8 years ago

Closed 8 years ago

#919 closed help (fixed)

can't seem to run model or reconfiguration executable

Reported by: anmcr Owned by: um_support
Component: UM Model Keywords:
Cc: Platform:
UM Version: 7.6

Description

Hi Willie,

I'm getting the error below all the time when I try to run a model or reconfiguration executable. I've tried recompiling, and also deleting all directories on Hector and Puma and starting from scratch. Could you please help.

In this case the job id is xhawh. But it also occured for xhawc and xhawh.

Thanks,

Andrew

more xhawh000.xhawh.d12268.t131018.rcf.leave


* anmcr Job: 906407.sdb starts: 24/09/12 13:57:16 host: phase3 *
* anmcr Job: 906407.sdb starts: 24/09/12 13:57:16 host: phase3 *
* anmcr Job: 906407.sdb starts: 24/09/12 13:57:16 host: phase3 *
* anmcr Job: 906407.sdb starts: 24/09/12 13:57:16 host: phase3 *

User may access requested budget
/home/n02/n02/anmcr/.profile[163]: module: not found [No such file or directory]
*

Version 7.6 template, Unified Model , Non-Operational
Created by UMUI version 7.6

*
/var/spool/PBS/mom_priv/jobs/906407.sdb.SC: line 83: syntax error at line 97: ` unmatched


Resources requested: mpparch=XT,mppnppn=32,mppwidth=256,ncpus=1,place=pack,walltime=00:20:00
Resources allocated: cpupercent=0,cput=00:00:00,mem=1744kb,ncpus=1,vmem=18524kb,walltime=00:00:01

* anmcr Job: 906407.sdb ends: 24/09/12 13:57:17 queue: par:8n_20m *
* anmcr Job: 906407.sdb ends: 24/09/12 13:57:17 queue: par:8n_20m *
* anmcr Job: 906407.sdb ends: 24/09/12 13:57:17 queue: par:8n_20m *
* anmcr Job: 906407.sdb ends: 24/09/12 13:57:17 queue: par:8n_20m *

Change History (5)

comment:1 Changed 8 years ago by ros

Hi Andrew,

I see your .profile on HECToR is based on a copy of mine, in there it does a

loadcomp $TARGET_MC

Before this line add the following 2 lines and then it should be able to find the "module" command ok.

. /etc/profile
. /etc/bash.bashrc

Cheers,
Ros.

comment:2 Changed 8 years ago by anmcr

Hi Ros,

Thanks for your reply.

I edited my .profile on HECToR as you suggested, but the problem still seems to be persisting. For example, with running job xhawh - see below.

Andrew

anmcr@hector-xe6-1:~/um/umui_out> more xhawh000.xhawh.d12269.t122410.leave


* anmcr Job: 907626.sdb starts: 25/09/12 12:27:26 host: phase3 *
* anmcr Job: 907626.sdb starts: 25/09/12 12:27:26 host: phase3 *
* anmcr Job: 907626.sdb starts: 25/09/12 12:27:26 host: phase3 *
* anmcr Job: 907626.sdb starts: 25/09/12 12:27:26 host: phase3 *

User may access requested budget
Cray PrgEnv? already loaded
xtpe-network-gemini
cce/8.0.0.135
PrgEnv?-cray/4.0.46
xtpe-interlagos
xt-mpich2/5.4.5
/var/spool/PBS/mom_priv/jobs/907626.sdb.SC[12]: .: syntax error at line 97: ` unmatched


Resources requested: mpparch=XT,mppnppn=32,mppwidth=768,ncpus=1,place=pack,walltime=06:00:00
Resources allocated: cpupercent=0,cput=00:00:00,mem=1748kb,ncpus=1,vmem=18524kb,walltime=00:00:04

* anmcr Job: 907626.sdb ends: 25/09/12 12:27:30 queue: par:32n_6h *
* anmcr Job: 907626.sdb ends: 25/09/12 12:27:30 queue: par:32n_6h *
* anmcr Job: 907626.sdb ends: 25/09/12 12:27:30 queue: par:32n_6h *
* anmcr Job: 907626.sdb ends: 25/09/12 12:27:30 queue: par:32n_6h *
anmcr@hector-xe6-1:~/um/umui_out>

comment:3 Changed 8 years ago by ros

Hi Andrew,

I was just looking at this again because I took a copy of your job and it ran fine. Looking in one of your UMUI job scripts, I think I've just found the problem. You have unmatching quotes in the job description. So we then get

export JOB_LINE='as xhawe (1.5km) but `1300x1300''

in the unix scripts which is causing the error message. Remove the quotes from the job description and it should work.

Cheers,
Ros.

comment:4 Changed 8 years ago by anmcr

Hi Ros,

Thanks for your help again.

That seems to be the problem sorted as the jobs are being submitted from the umui and running on HECToR.

Thanks,

Andrew

comment:5 Changed 8 years ago by ros

  • Resolution set to fixed
  • Status changed from new to closed
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