Changes between Version 3 and Version 4 of CDDS/halo


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Timestamp:
16/10/19 13:37:14 (3 months ago)
Author:
jjabram
Comment:

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  • CDDS/halo

    v3 v4  
    11= Documentation for CDDS Halo = 
    22 
    3 Suite '''u-bn582''' is built to remove halos from data sets. This step is necessary prior to converting data using CDDS. This suite can be found in the MOSRS repository using '''$ rosie go'''. 
     3Suite '''u-bn582''' is built to remove halos from data sets. The following steps are necessary prior to converting data using CDDS. This suite can be found in the MOSRS repository using '''$ rosie go'''. 
    44 
    55== Step 1: == 
    … …  
    99== Step 2: ==  
    1010 
    11 Copy suite u-bn582 and change two variables within the rose-suite.conf file, {{{HALO_START_DIR}}} and {{{root-dir{work}}}}: 
     11Copy suite u-bn582 and change two variables within the rose-suite.conf file, {{{HALO_START_DIR}}} and {{{ root-dir{work} }}}: 
    1212 
    13131. '''HALO_START_DIR''' 
    … …  
    2121}}} 
    2222 
    23 [[Image(Suite_structure.png)]] 
     23[[Image(suite_structure.png, align=center)]] 
    2424 
    2525 
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    2727 
    2828 
    29 This is where the cylc-run/work directory will be created during the run. The cylc-run/work directory is used as an intermediate space to store the data files while they are being de-haloed. This must be set to a location on the same group work space as '''HALO_START_DIR''' i.e. 
     29This is the location where the cylc-run/work directory will be created during the run. The cylc-run/work directory is used as an intermediate space to store data files while they are being de-haloed. This must be set to a location on the same group workspace as '''HALO_START_DIR''' i.e. 
    3030 
    3131{{{ 
    … …  
    3636 
    3737Run the suite. 
    38   
    39 The suite will start one cycle run per directory being put through the de-halo process. The cycle should fail during ‘file_check’ if it cannot find a corresponding directory. 
     38 The suite will start one cycle run per directory being put through the de-halo process. A cycle will fail during ‘file_check’ if it cannot find a corresponding directory. 
    4039 
    4140What you end up with: 
    … …  
    43421. Your '''HALO_START_DIR''' still contains all of your original directories, but these directories now only contain the original versions of .nc files which needed de-haloing. 
    4443 
    45 2. A new directory with the same name as the start directory, but which ends in ‘-cdds’(i.e. ‘u-aa123-cdds’) . This directory gets created at the start of the suite run at the same path location as the '''HALO_START_DIR'''. This will contain all of your data with the new .nc files which have been de-haloed. 
     442. A new directory with the same name as the start directory, but which ends in '''‘-cdds’''' (i.e. ‘u-aa123-cdds’) . This directory gets created at the start of the suite run at the same path location as the '''HALO_START_DIR'''. This will contain all of your data with the new .nc files which have been de-haloed. 
    4645 
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