Changes between Version 3 and Version 4 of Docs/AutomaticResubmission

16/04/15 17:20:25 (6 years ago)


  • Docs/AutomaticResubmission

    v3 v4  
    2020You can now submit this initial run in the normal way and when complete you should find only the first chunk has run, leaving some history files (*.*hist) and either all the restart dumps and the post processing files specified via STASH if automatic archiving has not been used or the last restart dump only if archiving is switched on and deletion of superseded dump files selected. 
    22 == Continuation Run 
     22== Continuation Run [=#CRUN] == 
    24 When you process jobs using the UMUI it produces a set of UNIX scripts on the local computer where you run the UMUI. These scripts should be in the directory 
    25 `$HOME/umui_jobs/<jobid>`. To create a continuation run: 
    26  * edit the UM script called `SUBMIT` in this directory 
     24[[span(style=color: #FF0000, Always check that the initial run (NRUN) has completed successfully.)]] 
     26To create the continuation run.  
     28**Before UM vn8.2**  
     30 * on your local machine do `cd ~/umui_jobs/jobname` 
     31 * edit the `SUBMIT` file 
    2732 * change the line `TYPE=NRUN` to `TYPE=CRUN` 
    28  * if your initial run was a compile and run job in one job then you need also to change to `STEP=4` in the `SUBMIT` script as well. 
     33 * if your initial run was a compile and run job in one job then you need also to change to 
     34   `STEP=4` 
     35   in the `SUBMIT` script as well. 
    2936 * save and exit 
    30  * resubmit the UM run as you did for the initial run. 
     37 * resubmit the UM run as you did for the initial run (NRUN) (Note: do not re-process as this will undo the changes you made to the files in `umui_jobs`). 
     39Alternatively you may have a hand-edit included in your job:  
     41 * In the UMUI navigate to ''!Input/Output control and resources -> User hand edit files'' 
     42 * Select {{{Y}}} for the following hand-edit: {{{~ros/HadGEM3-A/vn7.3/HGPKG1/crun.ed}}} 
     43 * Make sure that all compile steps are switched off in ''Compilation and modifications'':  
     44   * ''Compile options for the UM model''  
     45   * ''Compile options for the UM reconfiguration'' 
     46   * ''UM scripts build'' 
     47 * Then SAVE, PROCESS and SUBMIT 
     49**UM vn8.2 onwards** 
     51 * In the UMUI navigate to ''Compilation & run options → compile & run options for atmos & recon'' 
     52 * Switch off compilation of the model & reconfiguration 
     53 * Switch off "run the reconfiguration"  
     54 * The "type of model run" will then become active. Check that CRUN is selected.  
     55 * Then save, process and resubmit. 
    3257The run should continue from where the initial run finished and then each of the chunks should submit themselves automatically without further intervention. 
    36  * The maximum time limits for the standard queues on HECToR are 1,  3, 6 and 12 hours 
     61 * The maximum time limits for the standard queue on Archer is 24 hours. 
    3762 * Without automatic archiving disk space can fill up and cause the job to crash.