Changes between Version 99 and Version 100 of Projects/NEMOVAR/Notes


Ignore:
Timestamp:
04/08/15 17:47:41 (4 years ago)
Author:
cthomas
Comment:

Legend:

Unmodified
Added
Removed
Modified
  • Projects/NEMOVAR/Notes

    v99 v100  
    626626 
    627627Subdirectories created at end of IAU:  
    628 * analysis: LINKS to `work/<date>/nemo_cice_iau/nemo_nemovaro*{analysis_restart,pcbias}.nc` and `work/<date>/nemo_cice_iau/cice_restart.dat` 
     628* `analysis`: LINKS to `work/<date>/nemo_cice_iau/nemo_nemovaro*{analysis_restart,pcbias}.nc` and `work/<date>/nemo_cice_iau/cice_restart.dat` 
    629629 
    630630** Subsequent cycles ** 
    631631 
    632632Subdirectories created during the previous cycle: 
    633 * altbias: LINK to `share/cycle/<date-1>/updated_altbias/altbias.nc`.  
     633* `altbias`: LINK to `share/cycle/<date-1>/updated_altbias/altbias.nc`.  
    634634  This is created during nemovar stage of the previous cycle 
    635 * background: LINKS to restarts from previous step `share/cycle/<date-1>/analysis/{restart_NNNN.nc,pcbias_NNNN.nc}` and `share/cycle/<date-1>/analysis/cice_restart.dat` 
     635* `background`: LINKS to restarts from previous step `share/cycle/<date-1>/analysis/{restart_NNNN.nc,pcbias_NNNN.nc}` and `share/cycle/<date-1>/analysis/cice_restart.dat` 
    636636  This is created during the IAU stage of the previous cycle 
    637637 
    638638Subdirectories created at start of obsoper: 
    639 * fluxes: FILES of fluxes from <date-1> to <date+cycle_length> 
    640 * observations: FILES of observations to assimilate (profile, sea ice, altimetry, SST) for that day 
     639* `fluxes`: FILES of fluxes from <date-1> to <date+cycle_length> 
     640* `observations`: FILES of observations to assimilate (profile, sea ice, altimetry, SST) for that day 
    641641 
    642642Subdirectories created at end of obsoper: 
    643 * innovations: FILES of innovations for each of the observations (profile, sea ice, altimetry, SST) 
    644 * assim_background: LINKS to `work/<date>/nemo_cice_obsoper/assim_background_state_Jb*.nc` 
     643* `innovations`: FILES of innovations for each of the observations (profile, sea ice, altimetry, SST) 
     644* `assim_background`: LINKS to `work/<date>/nemo_cice_obsoper/assim_background_state_Jb*.nc` 
    645645 
    646646{{{ 
     
    664664 
    665665* nemo_cice_obsoper 
    666   - LINKS to the auxiliary inputs 
    667   - FILES: namelist, ice_in, Ocean.conf 
    668   - FILES: assim_background_state_Jb_NNNN.nc [pointed to by links from the share directory] 
    669   - assim_background_state_DI_NNNN.nc [what is this?] 
    670   - nemo_nemovari.* 
    671   - cice_restart.dat.<date> 
    672   - nemo_nemovaro_00000072_{analysis_restart,pcbias}*.nc  
    673   - {profb,slafb,sstfb,seaicefb}_01_fdbk_NNNN 
     666  * LINKS 
     667  * * auxiliary inputs 
     668  * FILES 
     669  * * `namelist, `ice_in`, `Ocean.conf` 
     670  * * `assim_background_state_Jb_NNNN.nc` [pointed to by links from the share directory] 
     671  * * `assim_background_state_DI_NNNN.nc` [what is this?] 
     672  * * `nemo_nemovari.*` 
     673  * * `cice_restart.dat.<date>` 
     674  * * `nemo_nemovaro_00000072_{analysis_restart,pcbias}*.nc`  
     675  * * `{profb,slafb,sstfb,seaicefb}_01_fdbk_NNNN` 
    674676  
    675677* nemovar 
    676   - data, inputs, outputs subdirectories 
    677   - LINKS to the auxiliary inputs 
    678   - LINKS: input directory 
    679   - assim_background_state_Jb_NNNN.nc 
    680   - background.normalization.*.nc 
    681   - FILES: background.mld.T_NNNN.nc 
    682   - ratio.out_NNNN.nc 
    683   - background.anavar.stddev.T_NNNN.nc 
    684   - normalization.lookup.NNNN.nc 
    685   - increments_o01_NNNN.nc [these are used later] 
    686   - altbiasout_NNNN.nc 
    687   - inner_{slafb,profb,sstb}_01_fdbk_NNNN.nc 
     678  * LINKS 
     679  * * auxiliary inputs 
     680  * * input directory 
     681  * * `assim_background_state_Jb_NNNN.nc` 
     682  * * `background.normalization.*.nc` 
     683  * FILES 
     684  * * data, inputs, outputs subdirectories 
     685  * * `background.mld.T_NNNN.nc` 
     686  * * `ratio.out_NNNN.nc` 
     687  * * `background.anavar.stddev.T_NNNN.nc` 
     688  * * `normalization.lookup.NNNN.nc` 
     689  * * `increments_o01_NNNN.nc` [these are used later] 
     690  * * `altbiasout_NNNN.nc` 
     691  * * `inner_{slafb,profb,sstb}_01_fdbk_NNNN.nc` 
    688692  
    689693* nemo_cice_iau 
    690   - LINKS to the auxiliary inputs 
    691   - FILES: nemo_nemovari_* 
    692   - nemo_nemovaro_* [pointed to by links from the share directory] 
    693   - cice_restart.dat.* [pointed to by links from the share directory] 
     694  * LINKS 
     695  * * auxiliary inputs 
     696  * FILES 
     697  * * `nemo_nemovari_*` 
     698  * * `nemo_nemovaro_*` [pointed to by links from the share directory] 
     699  * * `cice_restart.dat.*` [pointed to by links from the share directory] 
    694700 
    695701