Changes between Version 59 and Version 60 of Projects/NEMOVAR/Notes


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Timestamp:
31/07/15 11:01:51 (4 years ago)
Author:
cthomas
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  • Projects/NEMOVAR/Notes

    v59 v60  
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    33[[PageOutline(2-6,Contents)]] 
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    89Operation of the NEMO/NEMOVAR assimilation code is controlled by the Rose suite labelled puma-aa184, which is based on puma-aa164 (itself a copy of puma-aa145).  
    910The purpose of this suite is to assimilate data into a high-resolution ocean model using a cycling framework.  
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    1012 
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    2123 
    2224Information on Rose can be found [http://metomi.github.io/rose/doc/rose.html here] and a guide to cylc can be found [http://cylc.github.io/cylc/html/multi/cug-html.html here].  
     25 
     26The suite itself is quite simple and acts as a springboard for many other processes to run.  
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    4651The most variables which change most frequently are `START_POINT`, `RUN_LENGTH`, `CYCLE_LENGTH` and `WALL_CLOCK_LIMIT` (which needs to be larger for a longer assimilation cycle).  
    4752 
     53When assimilating large files it may also be necessary to increase the memory limit.  
     54This can be done by altering `ConsumableMemory` in the relevant place in `suite.rc`.   
     55 
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    4857 
    4958=== Apps included === 
     
    7180 
    7281 
    73 ==== daily_fluxes ==== 
    74  
    75 This corresponds to the subdirectory `operational_atmospheric_forcing`.  
     82==== Daily fluxes ==== 
     83 
     84The app is called `daily_fluxes` and corresponds to the subdirectory `operational_atmospheric_forcing`.  
    7685This app copies the daily flux files.  
    7786For day D and cycle length C, flux files from (D - 1) to (D + C) are required.  
     
    8796 
    8897 
    89 ==== daily_observations ==== 
    90  
    91 This corresponds to the subdirectory `hindcast_observations`.  
     98==== Daily observations ==== 
     99 
     100The app is called `daily_observations` and corresponds to the subdirectory `hindcast_observations`.  
    92101This app copies the daily observation files.  
    93102Everything in the `opt` directory controls a different set of observations.  
     
    101110 
    102111 
    103 ==== fixed_ancillary ==== 
    104  
    105 This corresponds to the subdirectory `GO5_orca025_ancillary`.  
     112 
     113==== Ancillary information ==== 
     114 
     115The app is called `fixed_ancillary` and corresponds to the subdirectory `GO5_orca025_ancillary`.  
    106116This app copies ancillary files into the output directory.  
    107117 
     
    112122 
    113123 
    114 ==== fixed_restarts ==== 
    115  
    116 This corresponds to the subdirectory `initial_restarts`. 
     124==== Initial restarts ==== 
     125 
     126The app is called `fixed_restarts` and corresponds to the subdirectory `initial_restarts`. 
    117127This app copies the initial restarts.  
    118128 
     
    121131 
    122132 
    123 ==== nemovar ==== 
    124  
    125 This corresponds to the subdirectory `nemovar`. 
     133==== NEMOVAR ==== 
     134 
     135The app is called `nemovar` and corresponds to the subdirectory `nemovar`. 
    126136This app configures NEMOVAR.  
    127137 
     
    139149 
    140150 
    141 ==== nemo_cice ==== 
    142  
    143 This corresponds to the subdirectory `GO5_nemo_GSI6_cice`. 
     151==== NEMO-CICE ==== 
     152 
     153The app is called `nemo_cice` and corresponds to the subdirectory `GO5_nemo_GSI6_cice`. 
    144154This app configures NEMO-CICE.  
    145155 
     
    156166 
    157167 
    158 ==== fcm_make_nemo ==== 
    159  
    160 This corresponds to the subdirectory `fcm_make_puma_GO5_nemo_GSI6_cice`. 
     168==== Build ==== 
     169 
     170The app is called `fcm_make_nemo` and corresponds to the subdirectory `fcm_make_puma_GO5_nemo_GSI6_cice`. 
    161171This app builds NEMO and related programs. 
    162172